STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_15870Ubiquitin carboxyl-terminal hydrolase. (282 aa)    
Predicted Functional Partners:
ADRM1
Proteasomal ubiquitin receptor ADRM1.
   
 0.957
Z169_14184
26S proteasome non-ATPase regulatory subunit 4.
    
 0.950
BARD1
BRCA1-associated RING domain protein 1.
    
 0.923
Z169_13073
26S proteasome non-ATPase regulatory subunit 14.
   
 0.899
PSMD2
26S proteasome non-ATPase regulatory subunit 2.
   
 0.898
PRPF38B
Pre-mRNA-splicing factor 38B.
 
      0.896
NFRKB
Nuclear factor related to kappa-B-binding protein.
    
 0.894
PSMD7
26S proteasome non-ATPase regulatory subunit 7.
   
 0.879
PSMD11
26S proteasome non-ATPase regulatory subunit 11.
   
 0.876
PSMB2
Proteasome subunit beta.
   
 0.874
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.