STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNIH4Protein cornichon 4. (116 aa)    
Predicted Functional Partners:
GRIA1
Glutamate receptor 1.
    
 0.873
GRIA3
Glutamate receptor 3.
    
 0.856
TMED10
Transmembrane protein Tmp21.
   
 0.842
Z169_00944
Glutamate receptor 2.
    
 0.841
GRIA4
Glutamate receptor 4.
    
 0.816
SEC24C
Protein transport protein Sec24C.
     
 0.799
Z169_10751
Transmembrane emp24 domain-containing protein 2.
    
 0.794
SEC24A
Protein transport protein Sec24A.
    
 0.745
Z169_12767
Protein transport protein Sec31B.
     
 0.727
Z169_08082
Protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.689
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.