STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_02815Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (514 aa)    
Predicted Functional Partners:
Z169_08776
Protein unc-79.
   
 0.989
SCN2B
Sodium channel subunit beta-2.
   
 0.918
CACNB2
Voltage-dependent L-type calcium channel subunit beta-2.
   
 0.651
Z169_08078
Intraflagellar transport protein 122.
   
 0.651
Z169_04267
Voltage-dependent L-type calcium channel subunit beta-4.
   
 0.651
SCN3B
Sodium channel subunit beta-3.
   
 0.648
IFT140
Intraflagellar transport protein 140.
    
 0.639
WDR19
WD repeat-containing protein 19.
    
 0.639
CALM1
Calmodulin; Belongs to the calmodulin family.
    
 
 0.602
Z169_12890
Calmodulin; Belongs to the calmodulin family.
    
 
 0.602
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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