Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAZ1A | CHRAC1 | A0A091KFE1 | A0A091IT64 | Bromodomain adjacent to zinc finger domain protein 1A. | Chromatin accessibility complex protein 1. | 0.857 |
BAZ1A | POLE3 | A0A091KFE1 | A0A091J223 | Bromodomain adjacent to zinc finger domain protein 1A. | DNA polymerase epsilon subunit 3. | 0.788 |
BAZ1A | SMARCA1 | A0A091KFE1 | A0A091JEC2 | Bromodomain adjacent to zinc finger domain protein 1A. | Putative global transcription activator SNF2L1. | 0.986 |
BAZ1A | Z169_02113 | A0A091KFE1 | A0A091IYR8 | Bromodomain adjacent to zinc finger domain protein 1A. | DNA polymerase epsilon subunit 3. | 0.788 |
BAZ1A | Z169_14868 | A0A091KFE1 | A0A091IYC4 | Bromodomain adjacent to zinc finger domain protein 1A. | Histone H2A; Belongs to the histone H2A family. | 0.515 |
BAZ1A | Z169_15445 | A0A091KFE1 | A0A091J775 | Bromodomain adjacent to zinc finger domain protein 1A. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.674 |
BAZ1B | CHRAC1 | A0A091JMC2 | A0A091IT64 | Tyrosine-protein kinase BAZ1B. | Chromatin accessibility complex protein 1. | 0.452 |
BAZ1B | POLE3 | A0A091JMC2 | A0A091J223 | Tyrosine-protein kinase BAZ1B. | DNA polymerase epsilon subunit 3. | 0.582 |
BAZ1B | SMARCA1 | A0A091JMC2 | A0A091JEC2 | Tyrosine-protein kinase BAZ1B. | Putative global transcription activator SNF2L1. | 0.952 |
BAZ1B | Z169_02113 | A0A091JMC2 | A0A091IYR8 | Tyrosine-protein kinase BAZ1B. | DNA polymerase epsilon subunit 3. | 0.582 |
BAZ1B | Z169_14868 | A0A091JMC2 | A0A091IYC4 | Tyrosine-protein kinase BAZ1B. | Histone H2A; Belongs to the histone H2A family. | 0.595 |
BAZ1B | Z169_15445 | A0A091JMC2 | A0A091J775 | Tyrosine-protein kinase BAZ1B. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.632 |
CHRAC1 | BAZ1A | A0A091IT64 | A0A091KFE1 | Chromatin accessibility complex protein 1. | Bromodomain adjacent to zinc finger domain protein 1A. | 0.857 |
CHRAC1 | BAZ1B | A0A091IT64 | A0A091JMC2 | Chromatin accessibility complex protein 1. | Tyrosine-protein kinase BAZ1B. | 0.452 |
CHRAC1 | POLE3 | A0A091IT64 | A0A091J223 | Chromatin accessibility complex protein 1. | DNA polymerase epsilon subunit 3. | 0.918 |
CHRAC1 | SMARCA1 | A0A091IT64 | A0A091JEC2 | Chromatin accessibility complex protein 1. | Putative global transcription activator SNF2L1. | 0.900 |
CHRAC1 | Z169_02113 | A0A091IT64 | A0A091IYR8 | Chromatin accessibility complex protein 1. | DNA polymerase epsilon subunit 3. | 0.918 |
POLE3 | BAZ1A | A0A091J223 | A0A091KFE1 | DNA polymerase epsilon subunit 3. | Bromodomain adjacent to zinc finger domain protein 1A. | 0.788 |
POLE3 | BAZ1B | A0A091J223 | A0A091JMC2 | DNA polymerase epsilon subunit 3. | Tyrosine-protein kinase BAZ1B. | 0.582 |
POLE3 | CHRAC1 | A0A091J223 | A0A091IT64 | DNA polymerase epsilon subunit 3. | Chromatin accessibility complex protein 1. | 0.918 |
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