STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_12726Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (2009 aa)    
Predicted Functional Partners:
MEAF6
Chromatin modification-related protein MEAF6.
    
 0.938
Z169_15199
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.919
Z169_01681
Male-specific lethal 1.
    
 0.902
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.893
Z169_15445
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.869
Z169_16170
Peregrin.
   
 0.869
MSL3
Male-specific lethal 3.
    
 0.847
MSL2
E3 ubiquitin-protein ligase MSL2.
   
 0.839
Z169_14334
Bromodomain-containing protein 1.
   
 0.822
Z169_14093
Mortality factor 4-like 1.
   
 0.820
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.