STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX47Putative ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (421 aa)    
Predicted Functional Partners:
ESF1
ESF1.
   
 
 0.982
KRR1
KRR1 small subunit processome component.
   
 0.937
Z169_01719
Protein RRP5.
   
 0.935
DDX52
Putative ATP-dependent RNA helicase DDX52.
  
0.934
NOP14
Nucleolar protein 14.
   
 0.913
FTSJ3
Pre-rRNA processing protein FTSJ3.
   
 0.898
DDX49
Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family.
  
 
0.898
DIEXF
Digestive organ expansion factor.
   
 
 0.887
DCAF13
DDB1-and CUL4-associated factor 13.
   
 0.884
UTP20
Small subunit processome component 20.
   
 0.880
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.