STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH2D4BSH2 domain-containing protein 4B. (429 aa)    
Predicted Functional Partners:
DYDC1
DPY30 domain-containing protein 2.
    
 
 0.504
UBOX5
RING finger protein 37.
      
 0.495
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.475
LONP2
Lon protease homolog; Belongs to the peptidase S16 family.
      
 0.452
FCHSD2
FCH and double SH3 domains protein 2.
    
 
 0.421
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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