STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS18L1Calcium-responsive transactivator. (356 aa)    
Predicted Functional Partners:
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
   
 
 0.631
BCL7B
B-cell CLL/lymphoma 7 protein family member B.
    
 
 0.594
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 
 0.570
Z169_15682
Zinc finger protein DPF3.
    
 
 0.516
PHF10
PHD finger protein 10.
    
 
 0.491
BCL7A
B-cell CLL/lymphoma 7 protein family member A.
    
 
 0.486
SMARCD2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2.
    
 
 0.486
SMARCA2
Putative global transcription activator SNF2L2.
   
 
 0.483
SMARCC1
SWI/SNF complex subunit SMARCC1.
   
 
 0.480
MTG2
Mitochondrial ribosome-associated GTPase 2.
 
    
 0.461
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.