STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDC3Enhancer of mRNA-decapping protein 3. (506 aa)    
Predicted Functional Partners:
DDX6
Putative ATP-dependent RNA helicase DDX6.
   
 0.998
DCP2
M7GpppN-mRNA hydrolase.
  
 0.998
DCP1A
mRNA-decapping enzyme 1A.
   
 0.998
Z169_06497
Protein PAT1 2.
    
 0.971
EDC4
Enhancer of mRNA-decapping protein 4.
   
 0.956
KIAA1279
KIF1-binding protein.
   
 0.954
CARKD
ATP-dependent (S)-NAD(P)H-hydrate dehydratase.
  
 
 0.920
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.898
LSM1
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
    
 0.873
XRN1
5'-3' exoribonuclease 1.
   
 
 0.864
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.