STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX25Sorting nexin-25. (834 aa)    
Predicted Functional Partners:
SNX14
Sorting nexin-14.
   
 
0.674
SNX27
Sorting nexin-27.
   
  
 0.530
ANKMY2
Ankyrin repeat and MYND domain-containing protein 2.
    
 
 0.529
Z169_16059
Sorting nexin-17.
      
 0.513
STARD3
StAR-related lipid transfer protein 3.
      
 0.495
PLD1
Phospholipase.
     
 0.456
TSPAN13
Tetraspanin-13; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.454
ANKRD10
Ankyrin repeat domain-containing protein 10.
    
 
 0.452
SNX2
Sorting nexin-2.
   
  
 0.427
SNX1
Sorting nexin-1.
   
  
 0.427
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.