STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX17Syntaxin-17. (301 aa)    
Predicted Functional Partners:
SNAP29
Synaptosomal-associated protein 29.
    
 0.998
VPS39
Vam6/Vps39-like.
   
 
 0.946
YKT6
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
   
 0.933
VPS41
Vacuolar protein sorting-associated protein 41.
    
 
 0.917
Z169_15656
Beta-soluble NSF attachment protein.
    
 0.868
VAMP7
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
   
 0.858
NSF
Vesicle-fusing ATPase.
   
 0.843
STX8
Syntaxin-8.
    
 0.833
BET1
BET1.
   
 0.814
SEC22B
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.811
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.