STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT10BtRNA methyltransferase 10 B. (124 aa)    
Predicted Functional Partners:
WDR4
tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4.
   
 
 0.646
TRMT5
tRNA (Guanine(37)-N1)-methyltransferase.
   
  
 0.619
FTSJ3
Pre-rRNA processing protein FTSJ3.
   
  
 0.611
PUS1
PseudoU_synth_1 domain-containing protein.
   
 
 0.565
PUS3
tRNA pseudouridine(38/39) synthase.
   
 
 0.565
MRPS31
Uncharacterized protein.
   
 
 0.559
TRIT1
Uncharacterized protein; Belongs to the IPP transferase family.
   
  
 0.557
METTL6
Methyltransferase-like 6.
   
  
 0.526
Z169_05546
Uncharacterized protein.
    
   0.520
KIAA0391
Mitochondrial ribonuclease P protein 3.
   
 0.505
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.