STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_00936Poly(RC)-binding protein 2. (249 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.573
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.534
TRA2A
Transformer-2 protein alpha.
   
 0.505
Z169_02591
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
  0.504
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.504
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.504
POLR2I
DNA-directed RNA polymerase II subunit RPB9; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.503
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 
  0.503
Z169_09543
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 
  0.503
TRA2B
Transformer-2 protein beta.
   
 0.498
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.