STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP11Thyroid receptor-interacting protein 11. (1902 aa)    
Predicted Functional Partners:
IFT20
Intraflagellar transport protein 20.
   
 0.945
GOLGA5
Golgin subfamily A member 5.
   
  
 0.559
NHS
Nance-Horan syndrome protein.
   
 0.546
ARL5B
ADP-ribosylation factor-like 5B; Belongs to the small GTPase superfamily. Arf family.
   
 0.528
ARF4
ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family.
   
 0.528
ARL6
ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.528
ARL5A
ADP-ribosylation factor-like 5A; Belongs to the small GTPase superfamily. Arf family.
   
 0.528
MIB1
E3 ubiquitin-protein ligase MIB1.
    
 0.516
TRIP13
Pachytene checkpoint protein 2; Belongs to the AAA ATPase family.
   
 0.505
Z169_12383
Coiled-coil domain-containing protein 27.
      
 0.501
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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