STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFU1Nfu_N domain-containing protein. (188 aa)    
Predicted Functional Partners:
NFS1
Aminotran_5 domain-containing protein.
  
 0.962
SDHB
4Fe-4S ferredoxin-type domain-containing protein.
  
 
 0.871
HMBS
Porphobilinogen deaminase.
 
      0.853
ISCA1
Fe-S_biosyn domain-containing protein.
  
 
 0.848
Z169_15349
Fe-S_biosyn domain-containing protein.
  
 
 0.843
GLRX3
Glutaredoxin-3.
   
 
 0.782
FXN
Uncharacterized protein.
   
  
 0.781
MOCOS
Molybdenum cofactor sulfurase.
    
 0.772
SDHD
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
   
  
 0.764
Z169_12164
2Fe-2S ferredoxin-type domain-containing protein.
  
  
 0.742
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.