STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTF3L4Transcription factor BTF3; Belongs to the NAC-beta family. (160 aa)    
Predicted Functional Partners:
NACA
Nascent polypeptide-associated complex subunit alpha, muscle-specific form.
   
 
 0.934
RPL31
60S ribosomal protein L31.
   
 
 0.890
RPL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.872
Z169_16194
NAC-alpha domain-containing protein 1.
   
 
 0.864
RPL6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.824
RPL14
60S ribosomal protein L14.
   
 
 0.804
RPL32
60S ribosomal protein L32.
   
   0.801
RPL30
60S ribosomal protein L30.
   
   0.787
RPS16
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.775
RPL24
60S ribosomal protein L24.
   
   0.761
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.