STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_06662Zinc finger protein 280D. (654 aa)    
Predicted Functional Partners:
PHF20L1
PHD finger protein 20-like 1.
   
 0.576
Z169_07137
E3 ubiquitin-protein ligase RNF216.
    
 
 0.505
CBX1
Chromobox protein 1.
    
   0.487
CBX3
Chromobox protein 3.
    
   0.487
LACE1
Lactation elevated protein 1.
      
 0.445
SYBU
Syntabulin.
  
 
  0.433
DTNBP1
Dysbindin.
      
 0.414
KDM5A
Lysine-specific demethylase 5A.
    
 0.412
WDR70
WD repeat-containing protein 70.
      
 0.404
ZMYM2
Zinc finger MYM-type protein 2.
   
 0.401
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.