STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_06680Protein unc-13 A. (110 aa)    
Predicted Functional Partners:
Z169_13788
Protein unc-13 B.
 
     
0.865
UNC13C
Protein unc-13 C.
 
    
 0.812
STXBP1
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.694
RIMS3
Regulating synaptic membrane exocytosis protein 3.
    
 0.684
Z169_13143
Regulating synaptic membrane exocytosis protein 1.
    
 0.684
Z169_04065
Liprin-alpha-2.
    
 0.680
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.676
RIMBP2
RIMS-binding protein 2.
   
 0.663
Z169_15808
Synaptobrevin.
   
 0.612
RIMS4
Regulating synaptic membrane exocytosis protein 4.
    
 0.564
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.