STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL13BADP-ribosylation factor-like 13B. (403 aa)    
Predicted Functional Partners:
INPP5E
72 kDa inositol polyphosphate 5-phosphatase.
     
 0.834
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
     
 0.815
RIC1
Protein RIC1.
    
 0.677
IFT22
Rab-like 5.
    
 
 0.666
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.659
VPS53
Vacuolar protein sorting-associated protein 53.
     
 0.649
ARL1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
0.641
KIF3A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.602
IFT81
Intraflagellar transport protein 81.
    
 
 0.593
Z169_09067
Centrosomal protein of 290 kDa.
   
 
 0.581
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.