STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAU1Double-stranded RNA-binding protein Staufen 1. (694 aa)    
Predicted Functional Partners:
DICER1
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
    
 0.951
DROSHA
Ribonuclease 3.
    
 0.839
MRPL44
Uncharacterized protein.
    
 0.787
AGO4
Protein argonaute-4.
    
 0.780
AGO3
Protein argonaute-3.
    
 0.780
UPF1
Regulator of nonsense transcripts 1.
    
 
 0.765
UEVLD
Ubiquitin-conjugating enzyme E2 variant 3.
   
 
 0.702
PCCB
Uncharacterized protein.
      
 0.577
Z169_01207
Src kinase-associated phosphoprotein 1.
      
 0.535
RPS6
40S ribosomal protein S6.
    
 
 0.523
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.