STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APCDD1Protein APCDD1. (496 aa)    
Predicted Functional Partners:
UTP20
Small subunit processome component 20.
   
  0.474
Z169_15719
Low-density lipoprotein receptor-related protein 5.
    
 0.469
Z169_12477
SH3 and multiple ankyrin repeat domains protein 3.
    
 0.433
Z169_12478
SH3 and multiple ankyrin repeat domains protein 3.
    
 0.433
RPS6
40S ribosomal protein S6.
   
  0.424
EMG1
Ribosomal RNA small subunit methyltransferase NEP1.
   
  0.415
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.414
DCAF13
DDB1-and CUL4-associated factor 13.
    
  0.414
UTP11L
Putative U3 small nucleolar RNA-associated protein 11.
    
  0.414
KRR1
KRR1 small subunit processome component.
    
  0.414
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.