Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AZI2 | CMC1 | A0A091IX61 | A0A091JMJ5 | 5-azacytidine-induced protein 2. | COX assembly mitochondrial protein. | 0.693 |
CCDC12 | CMC1 | A0A091JZV6 | A0A091JMJ5 | Coiled-coil domain-containing protein 12. | COX assembly mitochondrial protein. | 0.505 |
CMC1 | AZI2 | A0A091JMJ5 | A0A091IX61 | COX assembly mitochondrial protein. | 5-azacytidine-induced protein 2. | 0.693 |
CMC1 | CCDC12 | A0A091JMJ5 | A0A091JZV6 | COX assembly mitochondrial protein. | Coiled-coil domain-containing protein 12. | 0.505 |
CMC1 | TIMM10 | A0A091JMJ5 | A0A091J0N8 | COX assembly mitochondrial protein. | Mitochondrial import inner membrane translocase subunit Tim10. | 0.419 |
CMC1 | XRCC6BP1 | A0A091JMJ5 | A0A091JR33 | COX assembly mitochondrial protein. | Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. | 0.506 |
CMC1 | ZFC3H1 | A0A091JMJ5 | A0A091JN93 | COX assembly mitochondrial protein. | Zinc finger C3H1 domain-containing protein. | 0.422 |
TIMM10 | CMC1 | A0A091J0N8 | A0A091JMJ5 | Mitochondrial import inner membrane translocase subunit Tim10. | COX assembly mitochondrial protein. | 0.419 |
TIMM10 | XRCC6BP1 | A0A091J0N8 | A0A091JR33 | Mitochondrial import inner membrane translocase subunit Tim10. | Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. | 0.570 |
XRCC6BP1 | CMC1 | A0A091JR33 | A0A091JMJ5 | Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. | COX assembly mitochondrial protein. | 0.506 |
XRCC6BP1 | TIMM10 | A0A091JR33 | A0A091J0N8 | Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. | Mitochondrial import inner membrane translocase subunit Tim10. | 0.570 |
ZFC3H1 | CMC1 | A0A091JN93 | A0A091JMJ5 | Zinc finger C3H1 domain-containing protein. | COX assembly mitochondrial protein. | 0.422 |