STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO1CUnconventional myosin-Ic; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1030 aa)    
Predicted Functional Partners:
Z169_06687
Unconventional myosin-Vc.
 
  
  0.861
CALM1
Calmodulin; Belongs to the calmodulin family.
    
 0.768
Z169_12890
Calmodulin; Belongs to the calmodulin family.
    
 0.768
SMARCA1
Putative global transcription activator SNF2L1.
    
 0.707
BAZ1B
Tyrosine-protein kinase BAZ1B.
    
  0.691
Z169_12917
Calmodulin; Belongs to the calmodulin family.
    
 0.690
SF3B1
Splicing factor 3B subunit 1.
     
 0.652
DEK
Protein DEK.
     
 0.650
Z169_06351
DNA-directed RNA polymerase I subunit RPA49.
    
  0.649
ACTR2
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 0.626
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.