STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASF1AHistone chaperone ASF1. (204 aa)    
Predicted Functional Partners:
Z169_05494
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.998
Z169_15445
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.991
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 
 0.991
Z169_02192
TPR_REGION domain-containing protein.
   
 
 0.963
MCM2
DNA helicase; Belongs to the MCM family.
   
 
 0.951
UBN1
Ubinuclein-1.
    
 0.940
Z169_14868
Histone H2A; Belongs to the histone H2A family.
 
 
 
 0.934
CABIN1
Calcineurin-binding protein cabin-1.
    
 0.933
Z169_00120
Serine/threonine-protein kinase tousled-like 2.
    
 
 0.925
HAT1
Histone acetyltransferase type B catalytic subunit.
   
 
 0.908
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.