STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKRIP1PRKR-interacting protein 1. (111 aa)    
Predicted Functional Partners:
SLU7
Pre-mRNA-splicing factor SLU7.
   
 0.944
FAM32A
Protein FAM32A.
    
 0.923
SDE2
Protein SDE2.
    
 0.911
CDC40
Pre-mRNA-processing factor 17.
    
 0.869
Z169_12907
Cactin.
    
 0.849
NKAP
NKAP-like.
   
 0.840
SYF2
Pre-mRNA-splicing factor syf2.
   
  0.832
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
   0.823
CWC22
Pre-mRNA-splicing factor CWC22.
    
 0.816
SNRPG
Small nuclear ribonucleoprotein G.
    
   0.808
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.