STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_05255USP6 N-terminal-like. (377 aa)    
Predicted Functional Partners:
Z169_00624
Rab5 GDP/GTP exchange factor.
   
 0.673
RAB43
Ras-related protein Rab-43.
    
 0.585
RAB19
Ras-related protein Rab-19.
    
 0.585
Z169_00807
Ras-related protein Rab-5B.
    
 0.443
RAB17
Ras-related protein Rab-17.
    
 0.443
RAB5C
Ras-related protein Rab-5C.
    
 0.443
RAB5A
Ras-related protein Rab-5A.
    
 0.443
Z169_09886
Ras-related protein Rab-6A.
     
 0.407
Z169_05125
Ras-related protein Rab-6A.
     
 0.407
RAB36
Ras-related protein Rab-36.
     
 0.407
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.