STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_06392Transcription factor IIIA. (298 aa)    
Predicted Functional Partners:
Z169_06265
Transcription factor TFIIIB component B.
    
 0.770
BRF1
Transcription factor IIIB 90 kDa subunit.
   
 
 0.672
TBP
TATA-box-binding protein.
   
 0.626
POLR3C
DNA-directed RNA polymerase III subunit RPC3.
    
 0.600
Z169_14079
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.592
GTF3C4
General transcription factor 3C polypeptide 4.
    
 0.566
POLR3B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.564
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.563
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 
 0.558
POLR1C
DNA-directed RNA polymerases I and III subunit RPAC1.
    
 0.550
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.