STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDGG/T mismatch-specific thymine DNA glycosylase. (401 aa)    
Predicted Functional Partners:
SUMO1
Small ubiquitin-related modifier.
   
 0.960
Z169_08292
Small ubiquitin-related modifier.
   
 0.859
CREBBP
CREB-binding protein.
    
 
 0.721
UBE2I
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.704
UNG
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
      
 0.693
NTHL1
Endonuclease III-like 1.
      
 0.692
KCTD2
BTB/POZ domain-containing protein KCTD2.
   
 0.667
MUTYH
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.651
ADAT2
tRNA-specific adenosine deaminase 2.
   
  
 0.647
ABCB10
Uncharacterized protein.
      
 0.619
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.