STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF11Serine/arginine-rich splicing factor 11. (415 aa)    
Predicted Functional Partners:
SRSF2
Serine/arginine-rich splicing factor 2.
   
 0.755
RNPS1
RNA-binding protein with serine-rich domain 1.
   
 0.684
Z169_09530
Polyadenylate-binding protein 2.
   
 0.668
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.653
Z169_08764
Serine/arginine-rich splicing factor 7.
   
 0.637
SRSF7
Serine/arginine-rich splicing factor 7.
   
 0.637
UPF3A
Regulator of nonsense transcripts 3A.
   
 
 0.629
CDC40
Pre-mRNA-processing factor 17.
     
 0.628
Z169_00221
Serine/arginine-rich splicing factor 10.
   
 0.627
U2AF1
Splicing factor U2AF 35 kDa subunit.
   
 
 0.626
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.