STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC3AC-type lectin domain family 3 member A. (195 aa)    
Predicted Functional Partners:
VAT1L
Synaptic vesicle membrane protein VAT-1 homolog-like.
 
    
 0.662
CDYL2
Chromodomain Y-like 2.
      
 0.491
SYF2
Pre-mRNA-splicing factor syf2.
      
 0.449
Z169_03673
Tenascin-N.
    
 0.430
WWOX
WW domain-containing oxidoreductase.
      
 0.418
LPHN3
Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.
   
  0.415
TAF1D
TATA box-binding protein-associated factor RNA polymerase I subunit D.
      
 0.400
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.