STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAPAVesicle-associated membrane protein-associated protein A. (226 aa)    
Predicted Functional Partners:
STARD3
StAR-related lipid transfer protein 3.
    
 
 0.877
Z169_14638
Oxysterol-binding protein 1.
    
 0.732
Z169_14637
Oxysterol-binding protein 2.
    
 0.732
OSBPL1A
Oxysterol-binding protein; Belongs to the OSBP family.
    
 
 0.721
BCAP29
B-cell receptor-associated protein 29.
   
 0.711
VAPB
Vesicle-associated membrane protein-associated protein B.
  
0.666
PPM1L
Protein phosphatase 1L.
    
 0.660
Z169_15138
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
 0.642
STARD3NL
MLN64 N-terminal domain.
    
 
 0.629
OSBPL3
Oxysterol-binding protein-related protein 3.
    
 0.599
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.