STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNL1Fidgetin-like 1; Belongs to the AAA ATPase family. (691 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.986
IST1
IST1.
    
 0.716
Z169_15240
Nuclear protein localization protein 4.
    
 0.679
UFD1L
Ubiquitin fusion degradation protein 1.
    
 0.674
Z169_15656
Beta-soluble NSF attachment protein.
    
 0.672
Z169_05303
Charged multivesicular body protein 3.
   
 0.662
YOD1
Ubiquitin thioesterase OTU1.
   
 0.561
CHMP7
Charged multivesicular body protein 7.
   
 
 0.544
ATXN3
Ataxin-3.
    
 0.543
CHMP6
Charged multivesicular body protein 6.
     
 0.538
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.