STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAB21L3Protein mab-21-like 3. (348 aa)    
Predicted Functional Partners:
GMNC
Geminin coiled-coil domain-containing protein 1.
      
 0.644
Z169_09709
La-related protein 6.
      
 0.546
RFX4
Transcription factor RFX4.
      
 0.446
MAP3K1
Mitogen-activated protein kinase kinase kinase 1.
  
     0.439
SYT17
Synaptotagmin-17.
  
    0.424
THRSP
Mid1-interacting protein 1-B.
    
  0.403
Z169_07737
Mid1-interacting protein 1-B.
    
  0.403
EPB41L4A
Band 4.1-like 4A.
  
     0.400
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.