STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_09405L-seryl-tRNA(Sec) kinase. (220 aa)    
Predicted Functional Partners:
Z169_02226
Serine--tRNA ligase, cytoplasmic.
      
 0.693
SEPHS1
Selenide, water dikinase 1.
      
 0.693
EEFSEC
Selenocysteine-specific elongation factor.
      
 0.693
SEPSECS
O-phosphoseryl-tRNA(Sec) selenium transferase.
      
 0.693
TRNAU1AP
tRNA selenocysteine 1-associated protein 1.
      
 0.619
Z169_09173
Selenocysteine insertion sequence-binding protein 2.
      
 0.551
Z169_04545
Selenoprotein K.
      
 0.493
EIF2S3
Eukaryotic translation initiation factor 2 subunit 3.
      
 0.446
AARS2
AA_TRNA_LIGASE_II_ALA domain-containing protein.
      
 0.446
NFS1
Aminotran_5 domain-containing protein.
      
 0.418
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.