STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYCBPc-Myc-binding protein. (64 aa)    
Predicted Functional Partners:
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 
 0.898
Z169_08320
MYCBP-associated protein.
    
 
 0.706
YARS
Tyrosine--tRNA ligase.
      
 0.698
POLR3E
DNA-directed RNA polymerase III subunit RPC5.
      
 0.693
PGK1
Phosphoglycerate kinase.
    
 
 0.582
SPAG17
Sperm-associated antigen 17.
    
 
 0.515
Z169_13625
Uncharacterized protein KIAA1751.
    
 
 0.507
LRRC72
Leucine-rich repeat-containing protein 72.
    
 
 0.506
CFAP69
Uncharacterized protein C7orf63.
    
   0.501
POLR3C
DNA-directed RNA polymerase III subunit RPC3.
    
   0.501
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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