STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFRKBNuclear factor related to kappa-B-binding protein. (1152 aa)    
Predicted Functional Partners:
ACTR5
Actin-related protein 5; Belongs to the actin family.
   
 0.987
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
   
 0.943
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.938
INO80C
INO80 complex subunit C.
    
 0.912
Z169_15870
Ubiquitin carboxyl-terminal hydrolase.
    
 0.894
YY1
Transcriptional repressor protein YY1.
    
 0.856
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1.
    
 0.834
INO80D
INO80 complex subunit D.
    
 0.820
Z169_12303
Actin-like 6A; Belongs to the actin family.
    
  0.724
RPAP3
RNA polymerase II-associated protein 3.
    
 0.714
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.