STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_10410Caprin-2. (1099 aa)    
Predicted Functional Partners:
G3BP1
Ras GTPase-activating protein-binding protein 1.
   
 
 0.743
G3BP2
Ras GTPase-activating protein-binding protein 2.
   
 
 0.743
FMR1
Fragile X mental retardation protein 1 B.
    
 
 0.643
USP10
Ubiquitin carboxyl-terminal hydrolase 10.
   
 
 0.640
UBAP2L
Ubiquitin-associated protein 2-like.
   
 
 0.585
LSM14A
Protein LSM14 A.
   
 
 0.540
NAT10
N-acetyltransferase 10.
 
 
  
 0.520
OGFOD1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1.
      
 0.507
EIF3B
Eukaryotic translation initiation factor 3 subunit B.
    
 
 0.496
FXR1
Fragile X mental retardation syndrome-related protein 1.
    
 
 0.486
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.