STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKS6Ankyrin repeat and SAM domain-containing protein 6. (179 aa)    
Predicted Functional Partners:
ANKS3
Ankyrin repeat and SAM domain-containing protein 3.
    
 
 0.924
NEK8
Serine/threonine-protein kinase Nek8.
    
 0.714
NPHP3
Nephrocystin-3.
    
 0.664
INVS
Inversin.
    
 
 0.532
NEK7
Serine/threonine-protein kinase Nek7; Belongs to the protein kinase superfamily.
    
 
 0.511
NEK6
Serine/threonine-protein kinase Nek6; Belongs to the protein kinase superfamily.
    
 
 0.511
TMEM100
Transmembrane protein 100.
      
 0.467
IFT22
Rab-like 5.
    
 0.424
Z169_04048
Nephrocystin-1.
    
 0.401
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.