Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID1B | MYSM1 | A0A091K9R0 | A0A091IZN0 | AT-rich interactive domain-containing protein 1B. | Histone H2A deubiquitinase MYSM1. | 0.766 |
ARID1B | SMARCA2 | A0A091K9R0 | A0A091JES6 | AT-rich interactive domain-containing protein 1B. | Putative global transcription activator SNF2L2. | 0.903 |
ARID1B | SMARCB1 | A0A091K9R0 | A0A091IVF8 | AT-rich interactive domain-containing protein 1B. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. | 0.846 |
ARID1B | SMARCC1 | A0A091K9R0 | A0A091ITX1 | AT-rich interactive domain-containing protein 1B. | SWI/SNF complex subunit SMARCC1. | 0.895 |
ARID1B | SMARCD1 | A0A091K9R0 | A0A091KDX7 | AT-rich interactive domain-containing protein 1B. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1. | 0.675 |
ARID1B | SMARCD2 | A0A091K9R0 | A0A091JE34 | AT-rich interactive domain-containing protein 1B. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2. | 0.673 |
ARID1B | SMARCD3 | A0A091K9R0 | A0A091JA61 | AT-rich interactive domain-containing protein 1B. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3. | 0.675 |
ARID1B | SMARCE1 | A0A091K9R0 | A0A091JP09 | AT-rich interactive domain-containing protein 1B. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1. | 0.794 |
ARID1B | Z169_09571 | A0A091K9R0 | A0A091JL64 | AT-rich interactive domain-containing protein 1B. | AT-rich interactive domain-containing protein 1A. | 0.933 |
ARID1B | Z169_15682 | A0A091K9R0 | A0A091KCL1 | AT-rich interactive domain-containing protein 1B. | Zinc finger protein DPF3. | 0.730 |
MYSM1 | ARID1B | A0A091IZN0 | A0A091K9R0 | Histone H2A deubiquitinase MYSM1. | AT-rich interactive domain-containing protein 1B. | 0.766 |
MYSM1 | SMARCA2 | A0A091IZN0 | A0A091JES6 | Histone H2A deubiquitinase MYSM1. | Putative global transcription activator SNF2L2. | 0.841 |
MYSM1 | SMARCB1 | A0A091IZN0 | A0A091IVF8 | Histone H2A deubiquitinase MYSM1. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. | 0.957 |
MYSM1 | SMARCD1 | A0A091IZN0 | A0A091KDX7 | Histone H2A deubiquitinase MYSM1. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1. | 0.798 |
MYSM1 | SMARCD2 | A0A091IZN0 | A0A091JE34 | Histone H2A deubiquitinase MYSM1. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2. | 0.798 |
MYSM1 | SMARCD3 | A0A091IZN0 | A0A091JA61 | Histone H2A deubiquitinase MYSM1. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3. | 0.798 |
MYSM1 | SMARCE1 | A0A091IZN0 | A0A091JP09 | Histone H2A deubiquitinase MYSM1. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1. | 0.954 |
MYSM1 | Z169_09571 | A0A091IZN0 | A0A091JL64 | Histone H2A deubiquitinase MYSM1. | AT-rich interactive domain-containing protein 1A. | 0.766 |
MYSM1 | Z169_15682 | A0A091IZN0 | A0A091KCL1 | Histone H2A deubiquitinase MYSM1. | Zinc finger protein DPF3. | 0.602 |
SMARCA2 | ARID1B | A0A091JES6 | A0A091K9R0 | Putative global transcription activator SNF2L2. | AT-rich interactive domain-containing protein 1B. | 0.903 |
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