STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC32A1Vesicular inhibitory amino acid transporter. (395 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.678
GAD2
Glutamate decarboxylase 2.
   
 
 0.667
GAD1
Glutamate decarboxylase 1.
   
 
 0.645
Z169_15808
Synaptobrevin.
   
 
 0.637
SYT2
Synaptotagmin-2.
   
 
 0.587
SYT1
Synaptotagmin-1.
   
 
 0.587
STXBP1
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.549
DNAJC5
DnaJ subfamily C member 5.
    
 0.543
DNAJC5B
Cysteine string protein.
    
 0.543
GADL1
Glutamate decarboxylase-like 1.
   
 
 0.520
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.