STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3Q0G1RING-type domain-containing protein. (2008 aa)    
Predicted Functional Partners:
A0A5C3QKQ8
HECT domain-containing protein.
   
 
 0.986
A0A5C3QMS5
Ribosomal protein L23/L15e core domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.840
A0A5C3QV17
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
   0.839
A0A5C3QYJ0
Uncharacterized protein.
    
  0.822
A0A5C3QZB1
Uncharacterized protein.
    
  0.822
A0A5C3QVD4
Ribosomal protein L6, alpha-beta domain-containing protein.
   
   0.821
A0A5C3QEY8
Translation protein SH3-like domain-containing protein.
    
   0.816
A0A5C3QPX5
Ribosomal protein L16a; Belongs to the universal ribosomal protein uL13 family.
    
   0.809
A0A5C3Q961
Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.800
A0A5C3QEJ3
Ribosomal protein L32e.
    
   0.800
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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