STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3Q2A1PAS domain-containing protein. (1576 aa)    
Predicted Functional Partners:
A0A5C3QL44
Uncharacterized protein.
   
 0.998
A0A5C3R178
Uncharacterized protein.
    
 0.987
A0A5C3QMU7
BSD domain-containing protein.
    
 0.972
A0A5C3QA93
DNA helicase.
   
 0.970
A0A5C3R3P7
DNA repair helicase.
    
 0.943
A0A5C3QBS4
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
   
 0.929
A0A5C3Q6V7
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.914
A0A5C3QWT5
Thioesterase-like superfamily-domain-containing protein.
    
 0.896
A0A5C3QHF5
Transcription factor Tfb4-domain-containing protein.
    
 0.894
A0A5C3QUJ8
Ubiquitin-domain-containing protein.
    
 0.894
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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