A0A5C3Q2C3 protein (Pterula gracilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3Q2C3

Uncharacterized protein. (158 aa)

Predicted Functional Partners:

A0A5C3QYA1

0.788

A0A5C3QUJ8

0.632

A0A5C3R0M2

0.631

A0A5C3R3Z8

0.617

A0A5C3Q2I6

0.615

A0A5C3Q7S2

0.614

A0A5C3QC27

0.611

A0A5C3Q6N7

0.609

A0A5C3QW05

0.609

A0A5C3QXU2

0.609

Your Current Organism:

Pterula gracilis

NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3Q2C3	A0A5C3Q2I6	Uncharacterized protein.	UBA domain-containing protein.	0.615
A0A5C3Q2C3	A0A5C3Q6N7	Uncharacterized protein.	Snare-like protein; Belongs to the synaptobrevin family.	0.609
A0A5C3Q2C3	A0A5C3Q7S2	Uncharacterized protein.	PCI domain-containing protein.	0.614
A0A5C3Q2C3	A0A5C3QC27	Uncharacterized protein.	PCI domain-containing protein.	0.611
A0A5C3Q2C3	A0A5C3QUJ8	Uncharacterized protein.	Ubiquitin-domain-containing protein.	0.632
A0A5C3Q2C3	A0A5C3QW05	Uncharacterized protein.	PCI domain-containing protein.	0.609
A0A5C3Q2C3	A0A5C3QXU2	Uncharacterized protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.609
A0A5C3Q2C3	A0A5C3QYA1	Uncharacterized protein.	Uncharacterized protein.	0.788
A0A5C3Q2C3	A0A5C3R0M2	Uncharacterized protein.	Ubiquitin-related domain-containing protein.	0.631
A0A5C3Q2C3	A0A5C3R3Z8	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.617
A0A5C3Q2I6	A0A5C3Q2C3	UBA domain-containing protein.	Uncharacterized protein.	0.615
A0A5C3Q2I6	A0A5C3QUJ8	UBA domain-containing protein.	Ubiquitin-domain-containing protein.	0.629
A0A5C3Q2I6	A0A5C3QW05	UBA domain-containing protein.	PCI domain-containing protein.	0.487
A0A5C3Q2I6	A0A5C3QXU2	UBA domain-containing protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.478
A0A5C3Q2I6	A0A5C3R0M2	UBA domain-containing protein.	Ubiquitin-related domain-containing protein.	0.835
A0A5C3Q6N7	A0A5C3Q2C3	Snare-like protein; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.609
A0A5C3Q6N7	A0A5C3R3Z8	Snare-like protein; Belongs to the synaptobrevin family.	P-loop containing nucleoside triphosphate hydrolase protein.	0.821
A0A5C3Q7S2	A0A5C3Q2C3	PCI domain-containing protein.	Uncharacterized protein.	0.614
A0A5C3Q7S2	A0A5C3QC27	PCI domain-containing protein.	PCI domain-containing protein.	0.999
A0A5C3Q7S2	A0A5C3QUJ8	PCI domain-containing protein.	Ubiquitin-domain-containing protein.	0.963