STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3Q3D3Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
A0A5C3R4T5
Uncharacterized protein.
    
   0.900
A0A5C3QEU4
Mitochondrial ribosomal protein subunit L2.
   
 
 0.792
A0A5C3QVU5
Uncharacterized protein.
   
 
 0.787
A0A5C3QZP8
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.785
A0A5C3QBQ0
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.784
A0A5C3QFZ9
Mitochondrial ribosomal death-associated protein 3-domain-containing protein.
   
 
 0.769
A0A5C3QRS1
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.768
A0A5C3QZI5
Ribosomal protein L4 domain-containing protein.
   
 
 0.760
A0A5C3QW63
Uncharacterized protein.
   
   0.759
A0A5C3QDI1
Translation protein SH3-like domain-containing protein.
   
 
 0.757
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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