STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3Q4C8Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
A0A5C3QVS2
Histone H2B; Belongs to the histone H2B family.
    
 0.814
A0A5C3QVY3
Histone H2B; Belongs to the histone H2B family.
    
 0.814
A0A5C3QYB2
SNF2 family N-terminal domain-containing protein.
    
 0.802
A0A5C3QYE4
RNase III domain-containing protein.
    
 0.802
A0A5C3QG25
Histone deacetylase RPD3.
    
 0.801
A0A5C3QNJ5
Hist_deacetyl domain-containing protein.
    
 0.801
A0A5C3QRW8
Hist_deacetyl domain-containing protein.
    
 0.801
A0A5C3QWU7
Histone deacetylase complex, catalytic component RPD3.
    
 0.801
A0A5C3QJ22
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.783
A0A5C3QSZ7
F-box domain-containing protein.
    
 0.783
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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