A0A5C3Q7V0 protein (Pterula gracilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3Q7V0

PKS_ER domain-containing protein. (421 aa)

Predicted Functional Partners:

A0A5C3QCK5

0.637

A0A5C3QIV7

0.557

A0A5C3QQN6

0.557

A0A5C3QTU7

0.557

A0A5C3Q3B8

0.464

A0A5C3QTL4

0.463

A0A5C3QC34

0.458

A0A5C3QVA7

0.458

A0A5C3QMK6

0.452

A0A5C3QS98

0.452

Your Current Organism:

Pterula gracilis

NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3Q3B8	A0A5C3Q7V0	Uncharacterized protein.	PKS_ER domain-containing protein.	0.464
A0A5C3Q3B8	A0A5C3QVA7	Uncharacterized protein.	Succinate-semialdehyde dehydrogenase.	0.641
A0A5C3Q7V0	A0A5C3Q3B8	PKS_ER domain-containing protein.	Uncharacterized protein.	0.464
A0A5C3Q7V0	A0A5C3QC34	PKS_ER domain-containing protein.	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.458
A0A5C3Q7V0	A0A5C3QCK5	PKS_ER domain-containing protein.	Uncharacterized protein.	0.637
A0A5C3Q7V0	A0A5C3QIV7	PKS_ER domain-containing protein.	Polyketide synthase.	0.557
A0A5C3Q7V0	A0A5C3QMK6	PKS_ER domain-containing protein.	Uncharacterized protein.	0.452
A0A5C3Q7V0	A0A5C3QQN6	PKS_ER domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.557
A0A5C3Q7V0	A0A5C3QS98	PKS_ER domain-containing protein.	Epsilon subunit of F1F0-ATP synthase N-terminal domain-containing protein.	0.452
A0A5C3Q7V0	A0A5C3QTL4	PKS_ER domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.463
A0A5C3Q7V0	A0A5C3QTU7	PKS_ER domain-containing protein.	Thioesterase-like superfamily-domain-containing protein.	0.557
A0A5C3Q7V0	A0A5C3QVA7	PKS_ER domain-containing protein.	Succinate-semialdehyde dehydrogenase.	0.458
A0A5C3QC34	A0A5C3Q7V0	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	PKS_ER domain-containing protein.	0.458
A0A5C3QC34	A0A5C3QCK5	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.450
A0A5C3QC34	A0A5C3QIV7	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Polyketide synthase.	0.431
A0A5C3QC34	A0A5C3QQN6	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Zn(2)-C6 fungal-type domain-containing protein.	0.431
A0A5C3QC34	A0A5C3QTL4	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.768
A0A5C3QC34	A0A5C3QTU7	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Thioesterase-like superfamily-domain-containing protein.	0.431
A0A5C3QC34	A0A5C3QVA7	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Succinate-semialdehyde dehydrogenase.	0.463
A0A5C3QCK5	A0A5C3Q7V0	Uncharacterized protein.	PKS_ER domain-containing protein.	0.637