A0A5C3QC46 protein (Pterula gracilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3QC46

Uncharacterized protein. (349 aa)

Predicted Functional Partners:

A0A5C3QXB3

0.816

A0A5C3QHW9

0.748

A0A5C3QIH1

0.748

A0A5C3QUR4

0.603

cyn1

0.580

A0A5C3R1N0

0.580

A0A5C3Q3K6

0.516

A0A5C3QB72

0.516

A0A5C3QLP5

0.516

A0A5C3QMV4

0.516

Your Current Organism:

Pterula gracilis

NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A5C3Q3K6	A0A5C3QC46	A0A5C3Q3K6	A0A5C3QC46	Glycosyltransferase family 69 protein.	Uncharacterized protein.	0.516
A0A5C3QB72	A0A5C3QC46	A0A5C3QB72	A0A5C3QC46	Sulfate transporter family-domain-containing protein.	Uncharacterized protein.	0.516
A0A5C3QC46	A0A5C3Q3K6	A0A5C3QC46	A0A5C3Q3K6	Uncharacterized protein.	Glycosyltransferase family 69 protein.	0.516
A0A5C3QC46	A0A5C3QB72	A0A5C3QC46	A0A5C3QB72	Uncharacterized protein.	Sulfate transporter family-domain-containing protein.	0.516
A0A5C3QC46	A0A5C3QHW9	A0A5C3QC46	A0A5C3QHW9	Uncharacterized protein.	Glycoside hydrolase family 16 protein.	0.748
A0A5C3QC46	A0A5C3QIH1	A0A5C3QC46	A0A5C3QIH1	Uncharacterized protein.	TBCD protein.	0.748
A0A5C3QC46	A0A5C3QLP5	A0A5C3QC46	A0A5C3QLP5	Uncharacterized protein.	Sulfate transporter family-domain-containing protein.	0.516
A0A5C3QC46	A0A5C3QMV4	A0A5C3QC46	A0A5C3QMV4	Uncharacterized protein.	Sulfate anion transporter.	0.516
A0A5C3QC46	A0A5C3QUR4	A0A5C3QC46	A0A5C3QUR4	Uncharacterized protein.	Phosphoribosyltransferase-like protein.	0.603
A0A5C3QC46	A0A5C3QXB3	A0A5C3QC46	A0A5C3QXB3	Uncharacterized protein.	Acetyl-CoA carboxylase.	0.816
A0A5C3QC46	A0A5C3R1N0	A0A5C3QC46	A0A5C3R1N0	Uncharacterized protein.	Microsomal signal peptidase 25 kDa subunit-domain-containing protein.	0.580
A0A5C3QC46	cyn1	A0A5C3QC46	A0A5C3QTP4	Uncharacterized protein.	Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.	0.580
A0A5C3QHW9	A0A5C3QC46	A0A5C3QHW9	A0A5C3QC46	Glycoside hydrolase family 16 protein.	Uncharacterized protein.	0.748
A0A5C3QIH1	A0A5C3QC46	A0A5C3QIH1	A0A5C3QC46	TBCD protein.	Uncharacterized protein.	0.748
A0A5C3QLP5	A0A5C3QC46	A0A5C3QLP5	A0A5C3QC46	Sulfate transporter family-domain-containing protein.	Uncharacterized protein.	0.516
A0A5C3QMV4	A0A5C3QC46	A0A5C3QMV4	A0A5C3QC46	Sulfate anion transporter.	Uncharacterized protein.	0.516
A0A5C3QUR4	A0A5C3QC46	A0A5C3QUR4	A0A5C3QC46	Phosphoribosyltransferase-like protein.	Uncharacterized protein.	0.603
A0A5C3QXB3	A0A5C3QC46	A0A5C3QXB3	A0A5C3QC46	Acetyl-CoA carboxylase.	Uncharacterized protein.	0.816
A0A5C3R1N0	A0A5C3QC46	A0A5C3R1N0	A0A5C3QC46	Microsomal signal peptidase 25 kDa subunit-domain-containing protein.	Uncharacterized protein.	0.580
cyn1	A0A5C3QC46	A0A5C3QTP4	A0A5C3QC46	Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.	Uncharacterized protein.	0.580