STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QGS3Uncharacterized protein. (370 aa)    
Predicted Functional Partners:
A0A5C3QU14
SecY subunit domain-containing protein.
   
 
 0.888
A0A5C3QJ69
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
   0.851
A0A5C3R0L2
SecE/sec61-gamma protein.
    
   0.847
A0A5C3QJS4
60S ribosomal protein L5.
   
   0.846
A0A5C3QFB9
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.839
A0A5C3Q961
Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.837
A0A5C3QU88
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.832
A0A5C3QVM3
60S ribosomal protein L30.
   
   0.831
A0A5C3QKW5
60S ribosomal protein L8.
   
   0.829
A0A5C3QPX5
Ribosomal protein L16a; Belongs to the universal ribosomal protein uL13 family.
   
   0.829
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.