STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QLT1CBFD_NFYB_HMF domain-containing protein. (245 aa)    
Predicted Functional Partners:
A0A5C3QGJ6
Histone-fold-containing protein.
    
 0.979
A0A5C3QCN4
Histone-fold-containing protein.
   
 0.957
A0A5C3QHI0
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B-domain-containing protein.
    
 0.956
A0A5C3QTF8
Histone H3.3C.
   
 0.925
A0A5C3QPW9
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.911
A0A5C3QZY7
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
 0.888
A0A5C3QTZ0
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.645
A0A5C3QYV9
Uncharacterized protein.
    
 
 0.645
A0A5C3R1X8
BZIP domain-containing protein.
    
 
 0.645
A0A5C3R0C1
DNA-directed RNA polymerase RPB5 subunit.
   
 
 0.577
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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