STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3QMH8ArAE_2 domain-containing protein. (1228 aa)    
Predicted Functional Partners:
A0A5C3QYM0
TFIID-18kDa-domain-containing protein.
    
 
 0.817
A0A5C3R3Q1
Histone acetyltransferases subunit 3-domain-containing protein.
    
 
 0.816
A0A5C3QJX2
SGF29 tudor-like domain-containing protein.
    
 
 0.806
A0A5C3QAI5
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
   
 
 0.804
A0A5C3QIY5
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.797
A0A5C3QKS9
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 
 0.797
A0A5C3QHA3
WD40-repeat-containing domain protein.
 
      0.736
A0A5C3QY31
TATA box binding protein associated factor-domain-containing protein.
    
 
 0.706
A0A5C3QEM1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.695
A0A5C3QGS8
PB1 domain-containing protein.
   
 
 0.695
Your Current Organism:
Pterula gracilis
NCBI taxonomy Id: 1884261
Other names: Hirsutella gracilis, P. gracilis, Pistillaria gracilis, Typhula gracilis
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